neuroinformatics
πPluginneuromechanist/research-skills
Neuroscience data standards and experiment design: BIDS conversion/validation, HED annotation, and PsychoPy experiment scaffolding
Part of
neuromechanist/research-skills
Installation
/plugin marketplace add neuromechanist/research-skills/plugin install neuroinformatics@research-skillsMore from this repository8
Skill
Academic manuscript toolkit: literature review (multi-phase citation-traceable + single-pass thematic), peer review, writing, journal-specific formatting for submission, and humanizer pass to remove AI-writing tells
Publication-quality figures plugin. Seven skills + one QA agent: scientific-figure (svgutils composer with font validation; Inkscape/cairosvg export); transparent-icons (flat scientific icons via Codex CLI or OpenAI Images API); svg-figure (schematic authoring with consistency guidelines); svg-primitives (mm-precise SVG builder in Python: auto-fit boxes, tangent-correct arrows on straight/cubic/orthogonal routes, multi-waypoint paths, brackets/annotations/groups, layered z-order); ai-full-figure (AI substrate + programmatic label/arrow/scale-bar overlay); plot-styling (library decision tree + SciencePlots recipes for Nature/IEEE/Science/Cell/PNAS/APS); figure-qa agent (type-dispatching QA across SVG/raster/plot-script with strict programmatic-vs-VLM separation).
Presentation builder: create interactive Reveal.js presentations from JSON with Mermaid diagrams, LaTeX math, code highlighting, and animated reveals
Academic literature search, citation management, PDF retrieval, identifier conversion, and BibTeX export
Grant proposal toolkit: NIH/NSF writing with mechanism-specific templates, structured review with scoring criteria, and figure quality assurance
A skill marketplace for academic research: from project management to literature review, making figures and writing reports and grants.
Project lifecycle toolkit: initialization, cross-agent user-instruction setup, tiered model routing, epic/sprint workflow, PR review, onboarding, planning, debugging, engineering loop, agent fan-out, CI/CD, Docker, security, and document processing