google-deepmind

google-deepmind/science-skills

38 resources in this repository

GitHub
🎯38

🎯Skills38

🎯literature-search-arxiv🎯Skill

A scientific research skill from Google DeepMind's Science Skills collection that enables literature search on arXiv, providing structured instructions and helper scripts for querying and analyzing academic papers.

literature-search-arxiv
🎯literature-search-openalex🎯Skill

A science skill from Google DeepMind's collection that enables AI agents to search academic literature via the OpenAlex database, part of a broader suite covering genomics, structural biology, and cheminformatics research.

literature-search-openalex
🎯pubmed-database🎯Skill

A scientific research skill from Google DeepMind's Science Skills collection, providing AI agent capabilities for PubMed biomedical literature search as part of a broader suite covering genomics, structural biology, cheminformatics, and more.

pubmed-database
🎯workflow-skill-creator🎯Skill

A collection of AI agent skills for scientific research tasks spanning genomics, structural biology, cheminformatics, and literature search, designed to extend AI agent capabilities for specialized scientific workflows with Google Antigravity integration.

workflow-skill-creator
🎯literature-search-biorxiv🎯Skill

A science skill from Google DeepMind's collection that enables AI agents to search biomedical literature via the bioRxiv preprint server, part of a broader suite covering genomics, structural biology, and cheminformatics research.

literature-search-biorxiv
🎯literature-search-europepmc🎯Skill

A science skill from Google DeepMind's collection that enables AI agents to search biomedical literature via Europe PMC, part of a broader suite covering genomics, structural biology, and cheminformatics research.

literature-search-europepmc
🎯uv🎯Skill

A skill from Google DeepMind's Science Skills collection that provides guidance on using the uv package manager for handling Python dependencies in scientific research workflows spanning genomics, structural biology, cheminformatics, and literature search.

uv
🎯clinical-trials-database🎯Skill

A scientific research skill for searching and retrieving clinical trial records, enabling AI agents to explore therapeutic research data from ClinicalTrials.gov.

clinical-trials-database
🎯pdb-database🎯Skill

A scientific research skill from Google DeepMind's Science Skills collection that provides structured instructions and scripts for working with protein and molecular structure databases, part of a broader suite spanning genomics, structural biology, and cheminformatics.

pdb-database
🎯alphafold-database-fetch-and-analyze🎯Skill

A scientific research skill that fetches protein structure predictions from the AlphaFold database and provides workflows for structural analysis.

alphafold-database-fetch-and-analyze
🎯pubchem-database🎯Skill

A scientific research skill for querying the PubChem database to retrieve chemical compound structures, properties, and bioactivity data.

pubchem-database
🎯ncbi-sequence-fetch🎯Skill

A scientific research skill for fetching nucleotide and protein sequences from NCBI databases including GenBank and RefSeq.

ncbi-sequence-fetch
🎯openfda-database🎯Skill

A scientific research skill that queries the OpenFDA database to retrieve drug adverse events, medical device reports, and food safety data for analysis.

openfda-database
🎯pymol🎯Skill

A scientific research skill that enables AI agents to perform molecular visualization and structural analysis using PyMOL scripting commands.

pymol
🎯clinvar-database🎯Skill

A scientific research skill for querying the ClinVar database to retrieve clinical interpretations of genetic variants and their pathogenicity assessments.

clinvar-database
🎯uniprot-database🎯Skill

A scientific research skill for querying UniProt to retrieve comprehensive protein sequence data, functional annotations, and cross-references to other databases.

uniprot-database
🎯protein-sequence-similarity-search🎯Skill

A scientific research skill that performs protein sequence similarity searches using BLAST to identify homologous sequences across biological databases.

protein-sequence-similarity-search
🎯protein-sequence-msa🎯Skill

A scientific research skill that performs multiple sequence alignment (MSA) on protein sequences to identify conserved regions and evolutionary relationships.

protein-sequence-msa
🎯ensembl-database🎯Skill

A scientific research skill for accessing the Ensembl genome browser to retrieve gene annotations, genetic variations, and comparative genomics data.

ensembl-database
🎯dbsnp-database🎯Skill

A scientific research skill for querying the dbSNP database to retrieve reference data on SNPs, indels, and other genetic variations.

dbsnp-database
🎯chembl-database🎯Skill

A scientific research skill for querying the ChEMBL database to retrieve bioactivity data on drug-like compounds and their pharmacological targets.

chembl-database
🎯embl-ebi-ols🎯Skill

A scientific research skill for searching the EMBL-EBI Ontology Lookup Service to find and navigate biomedical ontology terms, hierarchies, and relationships.

embl-ebi-ols
🎯interpro-database🎯Skill

A scientific research skill for querying InterPro to classify proteins into families and predict functional domains, repeats, and important sites.

interpro-database
🎯opentargets-database🎯Skill

A scientific research skill for querying Open Targets to explore drug-target associations and disease-related genetic evidence for therapeutic research.

opentargets-database
🎯foldseek-structural-search🎯Skill

A scientific research skill that searches for structurally similar proteins using the Foldseek algorithm for fast 3D protein structure comparison.

foldseek-structural-search
🎯human-protein-atlas-database🎯Skill

A scientific research skill for querying the Human Protein Atlas to access protein expression and localization data across human tissues and cell types.

human-protein-atlas-database
🎯string-database🎯Skill

A scientific research skill for querying the STRING database to explore known and predicted protein-protein interaction networks and functional associations.

string-database
🎯reactome-database🎯Skill

A scientific research skill for querying the Reactome knowledgebase to explore curated biological pathways, reactions, and molecular processes.

reactome-database
🎯alphagenome-single-variant-analysis🎯Skill

A scientific research skill for analyzing the functional impact of single genetic variants using Google DeepMind's AlphaGenome model predictions.

alphagenome-single-variant-analysis
🎯quickgo-database🎯Skill

A scientific research skill for querying the QuickGO browser to retrieve Gene Ontology annotations and functional classifications of genes and proteins.

quickgo-database
🎯gnomad-database🎯Skill

A scientific research skill for querying the gnomAD database to retrieve population-level allele frequency data for assessing genetic variant rarity.

gnomad-database
🎯gtex-database🎯Skill

A scientific research skill for accessing the GTEx portal to retrieve gene expression data across human tissues, enabling tissue-specific regulation analysis.

gtex-database
🎯jaspar-database🎯Skill

A scientific research skill for querying the JASPAR database to retrieve transcription factor binding site profiles and DNA-binding motif data.

jaspar-database
🎯encode-ccres-database🎯Skill

A scientific research skill for querying the ENCODE Registry to access candidate cis-regulatory elements (cCREs) including promoters, enhancers, and insulators.

encode-ccres-database
🎯ucsc-conservation-and-tfbs🎯Skill

A scientific research skill for accessing UCSC Genome Browser data on evolutionary conservation scores and transcription factor binding site annotations.

ucsc-conservation-and-tfbs
🎯unibind-database🎯Skill

A scientific research skill for querying the UniBind database to access experimentally validated transcription factor binding site maps across cell types.

unibind-database
🎯scienceskillscommon🎯Skill

A collection of agent skills from Google DeepMind for scientific research tasks spanning genomics, structural biology, cheminformatics, literature search, and more, with scripts and references that extend AI agent capabilities for specialized scientific workflows.

scienceskillscommon
🎯science-skills-common🎯Skill

A shared foundation for Google DeepMind's Science Skills collection, providing agent capabilities for scientific research tasks across genomics, structural biology, cheminformatics, and literature search via Google Antigravity.

science-skills-common